org.apache.airavata.persistance.registry.jpa.impl
Class AiravataJPARegistry

java.lang.Object
  java.util.Observable
      org.apache.airavata.registry.api.AiravataRegistry2
          org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry

All Implemented Interfaces:

AiravataSubRegistry, ConfigurationRegistry, CredentialRegistry, DescriptorRegistry, ProjectsRegistry, ProvenanceRegistry, PublishedWorkflowRegistry, UserRegistry, UserWorkflowRegistry

public class AiravataJPARegistry
extends AiravataRegistry2

Field Summary

Fields inherited from class org.apache.airavata.registry.api.AiravataRegistry2

SERVICE_TTL

Constructor Summary

AiravataJPARegistry()

Method Summary

void	addApplicationDescriptor(ServiceDescription serviceDescription, HostDescription hostDescriptor, ApplicationDescription descriptor)
void	addApplicationDescriptor(String serviceName, String hostName, ApplicationDescription descriptor)
void	addApplicationJob(ApplicationJob job)
int	addApplicationJobExecutionError(ApplicationJobExecutionError error)
void	addConfiguration(String key, String value, Date expire)
void	addExperiment(String projectName, AiravataExperiment experiment)
int	addExperimentError(ExperimentExecutionError error)
void	addGFacURI(URI uri)
void	addGFacURI(URI uri, Date expire)
void	addHostDescriptor(HostDescription descriptor)
int	addNodeExecutionError(NodeExecutionError error)
void	addServiceDescriptor(ServiceDescription descriptor)
void	addWorkflow(String workflowName, String workflowGraphXml)
int	addWorkflowExecutionError(WorkflowExecutionError error)
void	addWorkflowInstance(String experimentId, String workflowInstanceId, String templateName)
void	addWorkflowInstanceNode(String workflowInstanceId, String nodeId)
void	addWorkflowInterpreterURI(URI uri)
void	addWorkflowInterpreterURI(URI uri, Date expire)
void	addWorkspaceProject(WorkspaceProject project)
String	createCredential(String gatewayId, String tokenId)
String	createCredential(String gatewayId, String tokenId, String username)
void	deleteWorkspaceProject(String projectName)
AiravataUser	getAiravataUser()
List<ExperimentData>	getAllExperimentMetaInformation(String user)
ApplicationDescription	getApplicationDescriptor(String serviceName, String hostname, String applicationName)
ResourceMetadata	getApplicationDescriptorMetadata(String serviceName, String hostName, String applicationName)
Map<String[],ApplicationDescription>	getApplicationDescriptors()
Map<String,ApplicationDescription>	getApplicationDescriptors(String serviceName)
ApplicationDescription	getApplicationDescriptors(String serviceName, String hostname)
ApplicationJob	getApplicationJob(String gfacJobId)
List<ApplicationJobExecutionError>	getApplicationJobErrors(String gfacJobId)
List<ApplicationJobExecutionError>	getApplicationJobErrors(String experimentId, String workflowInstanceId, String nodeId, String gfacJobId)
List<ApplicationJob>	getApplicationJobs(String experimentId, String workflowExecutionId, String nodeId)
List<ApplicationJob>	getApplicationJobsForDescriptors(String serviceDescriptionId, String hostDescriptionId, String applicationDescriptionId)
List<ApplicationJobStatusData>	getApplicationJobStatusHistory(String jobId)
PasswordCallback	getCallback()
Object	getConfiguration(String key) ---------------------------------Configuration Registry----------------------------------
List<Object>	getConfigurationList(String key)
URI	getConnectionURI()
String	getCredentialPublicKey(String gatewayId, String tokenId)
URI	getEventingServiceURI()
List<ExecutionError>	getExecutionErrors(String experimentId, String workflowInstanceId, String nodeId, String gfacJobId, ExecutionErrors.Source... filterBy)
ExperimentData	getExperiment(String experimentId)
List<ExperimentData>	getExperimentByUser(String user)
List<ExperimentData>	getExperimentByUser(String user, int pageSize, int pageNo)
List<ExperimentExecutionError>	getExperimentExecutionErrors(String experimentId)
String	getExperimentExecutionUser(String experimentId)
List<String>	getExperimentIdByUser(String user)
String	getExperimentMetadata(String experimentId)
ExperimentData	getExperimentMetaInformation(String experimentId)
String	getExperimentName(String experimentId)
List<AiravataExperiment>	getExperiments()
List<AiravataExperiment>	getExperiments(Date from, Date to)
List<ExperimentData>	getExperiments(HashMap<String,String> params)
List<AiravataExperiment>	getExperiments(String projectName)
List<AiravataExperiment>	getExperiments(String projectName, Date from, Date to)
List<WorkflowExecution>	getExperimentWorkflowInstances(String experimentId)
List<URI>	getGFacURIs()
HostDescription	getHostDescriptor(String hostName)
ResourceMetadata	getHostDescriptorMetadata(String hostName)
List<HostDescription>	getHostDescriptors()
URI	getMessageBoxURI()
List<NodeExecutionError>	getNodeExecutionErrors(String experimentId, String workflowInstanceId, String nodeId)
String	getPublishedWorkflowGraphXML(String workflowName)
ResourceMetadata	getPublishedWorkflowMetadata(String workflowName)
List<String>	getPublishedWorkflowNames()
Map<String,String>	getPublishedWorkflows()
ServiceDescription	getServiceDescriptor(String serviceName)
ResourceMetadata	getServiceDescriptorMetadata(String serviceName)
List<ServiceDescription>	getServiceDescriptors()
List<AiravataUser>	getUsers()
org.apache.airavata.common.utils.Version	getVersion()
List<WorkflowExecutionError>	getWorkflowExecutionErrors(String experimentId, String workflowInstanceId)
List<WorkflowIOData>	getWorkflowExecutionOutput(String experimentId) Deprecated.
WorkflowIOData	getWorkflowExecutionOutput(String experimentId, String outputNodeName) Deprecated.
String[]	getWorkflowExecutionOutputNames(String exeperimentId) Deprecated.
String	getWorkflowExecutionTemplateName(String workflowInstanceId)
String	getWorkflowGraphXML(String workflowName)
WorkflowExecutionData	getWorkflowInstanceData(String workflowInstanceId)
NodeExecutionData	getWorkflowInstanceNodeData(String workflowInstanceId, String nodeId)
List<WorkflowNodeIOData>	getWorkflowInstanceNodeInput(String workflowInstanceId, String nodeType)
List<WorkflowNodeIOData>	getWorkflowInstanceNodeOutput(String workflowInstanceId, String nodeType)
WorkflowExecutionStatus	getWorkflowInstanceStatus(String instanceId)
List<URI>	getWorkflowInterpreterURIs()
ResourceMetadata	getWorkflowMetadata(String workflowName)
Date	getWorkflowNodeStartTime(WorkflowInstanceNode workflowNode)
NodeExecutionStatus	getWorkflowNodeStatus(WorkflowInstanceNode workflowNode)
Map<String,String>	getWorkflows()
Date	getWorkflowStartTime(WorkflowExecution workflowInstance)
WorkspaceProject	getWorkspaceProject(String projectName)
List<WorkspaceProject>	getWorkspaceProjects()
protected void	initialize()
boolean	isActive()
boolean	isApplicationDescriptorExists(String serviceName, String hostName, String descriptorName)
boolean	isApplicationJobExists(String gfacJobId)
boolean	isCredentialExist(String gatewayId, String tokenId)
boolean	isExperimentExists(String experimentId)
boolean	isExperimentExists(String experimentId, boolean createIfNotPresent) ---------------------------------Provenance Registry----------------------------------
boolean	isExperimentNameExist(String experimentName)
boolean	isHostDescriptorExists(String descriptorName) ---------------------------------Descriptor Registry----------------------------------
boolean	isPublishedWorkflowExists(String workflowName) ---------------------------------Published Workflow Registry----------------------------------
boolean	isServiceDescriptorExists(String descriptorName)
boolean	isWorkflowExists(String workflowName) ---------------------------------User Workflow Registry----------------------------------
boolean	isWorkflowInstanceExists(String instanceId)
boolean	isWorkflowInstanceExists(String instanceId, boolean createIfNotPresent)
boolean	isWorkflowInstanceNodePresent(String workflowInstanceId, String nodeId)
boolean	isWorkflowInstanceNodePresent(String workflowInstanceId, String nodeId, boolean createIfNotPresent)
boolean	isWorkspaceProjectExists(String projectName)
boolean	isWorkspaceProjectExists(String projectName, boolean createIfNotExists)
void	publishWorkflow(String workflowName)
void	publishWorkflow(String workflowName, String publishWorkflowName)
void	removeAllConfiguration(String key)
void	removeAllGFacURI()
void	removeAllWorkflowInterpreterURI()
void	removeApplicationDescriptor(String serviceName, String hostName, String applicationName)
void	removeConfiguration(String key, String value)
void	removeExperiment(String experimentId)
void	removeGFacURI(URI uri)
void	removeHostDescriptor(String hostName)
void	removePublishedWorkflow(String workflowName)
void	removeServiceDescriptor(String serviceName)
void	removeWorkflow(String workflowName)
void	removeWorkflowInterpreterURI(URI uri)
void	saveWorkflowExecutionOutput(String experimentId, String outputNodeName, String output) Deprecated.
void	saveWorkflowExecutionOutput(String experimentId, WorkflowIOData data) Deprecated.
List<ExperimentData>	searchExperiments(String user, String experimentNameRegex)
List<WorkflowNodeIOData>	searchWorkflowInstanceNodeInput(String experimentIdRegEx, String workflowNameRegEx, String nodeNameRegEx)
List<WorkflowNodeIOData>	searchWorkflowInstanceNodeOutput(String experimentIdRegEx, String workflowNameRegEx, String nodeNameRegEx)
void	setAiravataRegistry(AiravataRegistry2 registry)
void	setAiravataUser(AiravataUser user)
void	setCallback(PasswordCallback callback)
void	setConfiguration(String key, String value, Date expire)
void	setConnectionURI(URI connectionURI)
void	setEventingURI(URI uri)
void	setEventingURI(URI uri, Date expire)
void	setMessageBoxURI(URI uri)
void	setMessageBoxURI(URI uri, Date expire)
void	setWorkflowInstanceTemplateName(String workflowInstanceId, String templateName)
void	udpateApplicationDescriptor(ServiceDescription serviceDescription, HostDescription hostDescriptor, ApplicationDescription descriptor)
void	unsetEventingURI()
void	unsetMessageBoxURI()
void	updateApplicationDescriptor(String serviceName, String hostName, ApplicationDescription descriptor)
void	updateApplicationJob(ApplicationJob job)
void	updateApplicationJobData(String gfacJobId, String jobdata)
void	updateApplicationJobMetadata(String gfacJobId, String metadata)
void	updateApplicationJobStatus(String gfacJobId, ApplicationJob.ApplicationJobStatus status, Date statusUpdateTime)
void	updateApplicationJobStatusUpdateTime(String gfacJobId, Date completed)
void	updateApplicationJobSubmittedTime(String gfacJobId, Date submitted)
void	updateExperimentExecutionUser(String experimentId, String user)
void	updateExperimentMetadata(String experimentId, String metadata)
void	updateExperimentName(String experimentId, String experimentName)
void	updateHostDescriptor(HostDescription descriptor)
void	updateServiceDescriptor(ServiceDescription descriptor)
void	updateWorkflow(String workflowName, String workflowGraphXml)
void	updateWorkflowInstanceStatus(String instanceId, WorkflowExecutionStatus.State status)
void	updateWorkflowInstanceStatus(WorkflowExecutionStatus status)
void	updateWorkflowNodeGramData(WorkflowNodeGramData workflowNodeGramData)
void	updateWorkflowNodeInput(WorkflowInstanceNode node, String data)
void	updateWorkflowNodeOutput(WorkflowInstanceNode node, String data)
void	updateWorkflowNodeStatus(NodeExecutionStatus workflowStatusNode)
void	updateWorkflowNodeStatus(String workflowInstanceId, String nodeId, WorkflowExecutionStatus.State status)
void	updateWorkflowNodeStatus(WorkflowInstanceNode workflowNode, WorkflowExecutionStatus.State status)
void	updateWorkflowNodeType(WorkflowInstanceNode node, WorkflowNodeType type)
void	updateWorkspaceProject(WorkspaceProject project)

Methods inherited from class org.apache.airavata.registry.api.AiravataRegistry2

getGateway, getUser, preInitialize, setGateway, setUser

Methods inherited from class java.util.Observable

addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AiravataJPARegistry

public AiravataJPARegistry()

Method Detail

initialize

protected void initialize()
                   throws RegistryException

Specified by:

initialize in class AiravataRegistry2

Throws:

RegistryException

isActive

public boolean isActive()

getConfiguration

public Object getConfiguration(String key)
                        throws RegistryException

---------------------------------Configuration Registry----------------------------------

Throws:

RegistryException

getConfigurationList

public List<Object> getConfigurationList(String key)
                                  throws RegistryException

Throws:

RegistryException

setConfiguration

public void setConfiguration(String key,
                             String value,
                             Date expire)
                      throws RegistryException

Throws:

RegistryException

addConfiguration

public void addConfiguration(String key,
                             String value,
                             Date expire)
                      throws RegistryException

Throws:

RegistryException

removeAllConfiguration

public void removeAllConfiguration(String key)
                            throws RegistryException

Throws:

RegistryException

removeConfiguration

public void removeConfiguration(String key,
                                String value)
                         throws RegistryException

Throws:

RegistryException

getGFacURIs

public List<URI> getGFacURIs()
                      throws RegistryException

Throws:

RegistryException

getWorkflowInterpreterURIs

public List<URI> getWorkflowInterpreterURIs()
                                     throws RegistryException

Throws:

RegistryException

getEventingServiceURI

public URI getEventingServiceURI()
                          throws RegistryException

Throws:

RegistryException

getMessageBoxURI

public URI getMessageBoxURI()
                     throws RegistryException

Throws:

RegistryException

addGFacURI

public void addGFacURI(URI uri)
                throws RegistryException

Throws:

RegistryException

addWorkflowInterpreterURI

public void addWorkflowInterpreterURI(URI uri)
                               throws RegistryException

Throws:

RegistryException

setEventingURI

public void setEventingURI(URI uri)
                    throws RegistryException

Throws:

RegistryException

setMessageBoxURI

public void setMessageBoxURI(URI uri)
                      throws RegistryException

Throws:

RegistryException

addGFacURI

public void addGFacURI(URI uri,
                       Date expire)
                throws RegistryException

Throws:

RegistryException

addWorkflowInterpreterURI

public void addWorkflowInterpreterURI(URI uri,
                                      Date expire)
                               throws RegistryException

Throws:

RegistryException

setEventingURI

public void setEventingURI(URI uri,
                           Date expire)
                    throws RegistryException

Throws:

RegistryException

setMessageBoxURI

public void setMessageBoxURI(URI uri,
                             Date expire)
                      throws RegistryException

Throws:

RegistryException

removeGFacURI

public void removeGFacURI(URI uri)
                   throws RegistryException

Throws:

RegistryException

removeWorkflowInterpreterURI

public void removeWorkflowInterpreterURI(URI uri)
                                  throws RegistryException

Throws:

RegistryException

removeAllGFacURI

public void removeAllGFacURI()
                      throws RegistryException

Throws:

RegistryException

removeAllWorkflowInterpreterURI

public void removeAllWorkflowInterpreterURI()
                                     throws RegistryException

Throws:

RegistryException

unsetEventingURI

public void unsetEventingURI()
                      throws RegistryException

Throws:

RegistryException

unsetMessageBoxURI

public void unsetMessageBoxURI()
                        throws RegistryException

Throws:

RegistryException

isHostDescriptorExists

public boolean isHostDescriptorExists(String descriptorName)
                               throws RegistryException

---------------------------------Descriptor Registry----------------------------------

Throws:

RegistryException

addHostDescriptor

public void addHostDescriptor(HostDescription descriptor)
                       throws RegistryException

Throws:

RegistryException

updateHostDescriptor

public void updateHostDescriptor(HostDescription descriptor)
                          throws RegistryException

Throws:

RegistryException

getHostDescriptor

public HostDescription getHostDescriptor(String hostName)
                                  throws RegistryException

Throws:

RegistryException

removeHostDescriptor

public void removeHostDescriptor(String hostName)
                          throws RegistryException

Throws:

RegistryException

getHostDescriptors

public List<HostDescription> getHostDescriptors()
                                         throws MalformedDescriptorException,
                                                RegistryException

Throws:

MalformedDescriptorException

RegistryException

getHostDescriptorMetadata

public ResourceMetadata getHostDescriptorMetadata(String hostName)
                                           throws RegistryException

Throws:

RegistryException

isServiceDescriptorExists

public boolean isServiceDescriptorExists(String descriptorName)
                                  throws RegistryException

Throws:

RegistryException

addServiceDescriptor

public void addServiceDescriptor(ServiceDescription descriptor)
                          throws RegistryException

Throws:

RegistryException

updateServiceDescriptor

public void updateServiceDescriptor(ServiceDescription descriptor)
                             throws RegistryException

Throws:

RegistryException

getServiceDescriptor

public ServiceDescription getServiceDescriptor(String serviceName)
                                        throws RegistryException,
                                               MalformedDescriptorException

Throws:

RegistryException

MalformedDescriptorException

removeServiceDescriptor

public void removeServiceDescriptor(String serviceName)
                             throws RegistryException

Throws:

RegistryException

getServiceDescriptors

public List<ServiceDescription> getServiceDescriptors()
                                               throws MalformedDescriptorException,
                                                      RegistryException

Throws:

MalformedDescriptorException

RegistryException

getServiceDescriptorMetadata

public ResourceMetadata getServiceDescriptorMetadata(String serviceName)
                                              throws RegistryException

Throws:

RegistryException

isApplicationDescriptorExists

public boolean isApplicationDescriptorExists(String serviceName,
                                             String hostName,
                                             String descriptorName)
                                      throws RegistryException

Throws:

RegistryException

addApplicationDescriptor

public void addApplicationDescriptor(ServiceDescription serviceDescription,
                                     HostDescription hostDescriptor,
                                     ApplicationDescription descriptor)
                              throws RegistryException

Throws:

RegistryException

addApplicationDescriptor

public void addApplicationDescriptor(String serviceName,
                                     String hostName,
                                     ApplicationDescription descriptor)
                              throws RegistryException

Throws:

RegistryException

udpateApplicationDescriptor

public void udpateApplicationDescriptor(ServiceDescription serviceDescription,
                                        HostDescription hostDescriptor,
                                        ApplicationDescription descriptor)
                                 throws RegistryException

Throws:

RegistryException

updateApplicationDescriptor

public void updateApplicationDescriptor(String serviceName,
                                        String hostName,
                                        ApplicationDescription descriptor)
                                 throws RegistryException

Throws:

RegistryException

getApplicationDescriptor

public ApplicationDescription getApplicationDescriptor(String serviceName,
                                                       String hostname,
                                                       String applicationName)
                                                throws DescriptorDoesNotExistsException,
                                                       MalformedDescriptorException,
                                                       RegistryException

Throws:

DescriptorDoesNotExistsException

MalformedDescriptorException

RegistryException

getApplicationDescriptors

public ApplicationDescription getApplicationDescriptors(String serviceName,
                                                        String hostname)
                                                 throws RegistryException

Throws:

RegistryException

getApplicationDescriptors

public Map<String,ApplicationDescription> getApplicationDescriptors(String serviceName)
                                                             throws RegistryException

Throws:

RegistryException

getApplicationDescriptors

public Map<String[],ApplicationDescription> getApplicationDescriptors()
                                                               throws MalformedDescriptorException,
                                                                      RegistryException

Throws:

MalformedDescriptorException

RegistryException

removeApplicationDescriptor

public void removeApplicationDescriptor(String serviceName,
                                        String hostName,
                                        String applicationName)
                                 throws RegistryException

Throws:

RegistryException

getApplicationDescriptorMetadata

public ResourceMetadata getApplicationDescriptorMetadata(String serviceName,
                                                         String hostName,
                                                         String applicationName)
                                                  throws RegistryException

Throws:

RegistryException

isWorkspaceProjectExists

public boolean isWorkspaceProjectExists(String projectName)
                                 throws RegistryException

Throws:

RegistryException

isWorkspaceProjectExists

public boolean isWorkspaceProjectExists(String projectName,
                                        boolean createIfNotExists)
                                 throws RegistryException

Throws:

RegistryException

addWorkspaceProject

public void addWorkspaceProject(WorkspaceProject project)
                         throws RegistryException

Throws:

RegistryException

updateWorkspaceProject

public void updateWorkspaceProject(WorkspaceProject project)
                            throws RegistryException

Throws:

RegistryException

deleteWorkspaceProject

public void deleteWorkspaceProject(String projectName)
                            throws RegistryException

Throws:

RegistryException

getWorkspaceProject

public WorkspaceProject getWorkspaceProject(String projectName)
                                     throws RegistryException

Throws:

RegistryException

getWorkspaceProjects

public List<WorkspaceProject> getWorkspaceProjects()
                                            throws RegistryException

Throws:

RegistryException

addExperiment

public void addExperiment(String projectName,
                          AiravataExperiment experiment)
                   throws RegistryException

Throws:

RegistryException

removeExperiment

public void removeExperiment(String experimentId)
                      throws ExperimentDoesNotExistsException

Throws:

ExperimentDoesNotExistsException

getExperiments

public List<AiravataExperiment> getExperiments()
                                        throws RegistryException

Throws:

RegistryException

getExperiments

public List<AiravataExperiment> getExperiments(String projectName)
                                        throws RegistryException

Throws:

RegistryException

getExperiments

public List<AiravataExperiment> getExperiments(Date from,
                                               Date to)
                                        throws RegistryException

Throws:

RegistryException

getExperiments

public List<AiravataExperiment> getExperiments(String projectName,
                                               Date from,
                                               Date to)
                                        throws RegistryException

Throws:

RegistryException

isPublishedWorkflowExists

public boolean isPublishedWorkflowExists(String workflowName)
                                  throws RegistryException

---------------------------------Published Workflow Registry----------------------------------

Throws:

RegistryException

publishWorkflow

public void publishWorkflow(String workflowName,
                            String publishWorkflowName)
                     throws RegistryException

Throws:

RegistryException

publishWorkflow

public void publishWorkflow(String workflowName)
                     throws RegistryException

Throws:

RegistryException

getPublishedWorkflowGraphXML

public String getPublishedWorkflowGraphXML(String workflowName)
                                    throws RegistryException

Throws:

RegistryException

getPublishedWorkflowNames

public List<String> getPublishedWorkflowNames()
                                       throws RegistryException

Throws:

RegistryException

getPublishedWorkflows

public Map<String,String> getPublishedWorkflows()
                                         throws RegistryException

Throws:

RegistryException

removePublishedWorkflow

public void removePublishedWorkflow(String workflowName)
                             throws RegistryException

Throws:

RegistryException

getPublishedWorkflowMetadata

public ResourceMetadata getPublishedWorkflowMetadata(String workflowName)
                                              throws RegistryException

Throws:

RegistryException

isWorkflowExists

public boolean isWorkflowExists(String workflowName)
                         throws RegistryException

---------------------------------User Workflow Registry----------------------------------

Throws:

RegistryException

addWorkflow

public void addWorkflow(String workflowName,
                        String workflowGraphXml)
                 throws RegistryException

Throws:

RegistryException

updateWorkflow

public void updateWorkflow(String workflowName,
                           String workflowGraphXml)
                    throws RegistryException

Throws:

RegistryException

getWorkflowGraphXML

public String getWorkflowGraphXML(String workflowName)
                           throws RegistryException

Throws:

RegistryException

getWorkflows

public Map<String,String> getWorkflows()
                                throws RegistryException

Throws:

RegistryException

removeWorkflow

public void removeWorkflow(String workflowName)
                    throws RegistryException

Throws:

RegistryException

getWorkflowMetadata

public ResourceMetadata getWorkflowMetadata(String workflowName)
                                     throws RegistryException

Throws:

RegistryException

setAiravataRegistry

public void setAiravataRegistry(AiravataRegistry2 registry)

setAiravataUser

public void setAiravataUser(AiravataUser user)

getAiravataUser

public AiravataUser getAiravataUser()

isExperimentExists

public boolean isExperimentExists(String experimentId,
                                  boolean createIfNotPresent)
                           throws RegistryException

---------------------------------Provenance Registry----------------------------------

Throws:

RegistryException

isExperimentExists

public boolean isExperimentExists(String experimentId)
                           throws RegistryException

Throws:

RegistryException

updateExperimentExecutionUser

public void updateExperimentExecutionUser(String experimentId,
                                          String user)
                                   throws RegistryException

Throws:

RegistryException

getExperimentExecutionUser

public String getExperimentExecutionUser(String experimentId)
                                  throws RegistryException

Throws:

RegistryException

isExperimentNameExist

public boolean isExperimentNameExist(String experimentName)
                              throws RegistryException

Throws:

RegistryException

getExperimentName

public String getExperimentName(String experimentId)
                         throws RegistryException

Throws:

RegistryException

updateExperimentName

public void updateExperimentName(String experimentId,
                                 String experimentName)
                          throws RegistryException

Throws:

RegistryException

getExperimentMetadata

public String getExperimentMetadata(String experimentId)
                             throws RegistryException

Throws:

RegistryException

updateExperimentMetadata

public void updateExperimentMetadata(String experimentId,
                                     String metadata)
                              throws RegistryException

Throws:

RegistryException

getWorkflowExecutionTemplateName

public String getWorkflowExecutionTemplateName(String workflowInstanceId)
                                        throws RegistryException

Throws:

RegistryException

setWorkflowInstanceTemplateName

public void setWorkflowInstanceTemplateName(String workflowInstanceId,
                                            String templateName)
                                     throws RegistryException

Throws:

RegistryException

getExperimentWorkflowInstances

public List<WorkflowExecution> getExperimentWorkflowInstances(String experimentId)
                                                       throws RegistryException

Throws:

RegistryException

isWorkflowInstanceExists

public boolean isWorkflowInstanceExists(String instanceId,
                                        boolean createIfNotPresent)
                                 throws RegistryException

Throws:

RegistryException

isWorkflowInstanceExists

public boolean isWorkflowInstanceExists(String instanceId)
                                 throws RegistryException

Throws:

RegistryException

updateWorkflowInstanceStatus

public void updateWorkflowInstanceStatus(String instanceId,
                                         WorkflowExecutionStatus.State status)
                                  throws RegistryException

Throws:

RegistryException

updateWorkflowInstanceStatus

public void updateWorkflowInstanceStatus(WorkflowExecutionStatus status)
                                  throws RegistryException

Throws:

RegistryException

getWorkflowInstanceStatus

public WorkflowExecutionStatus getWorkflowInstanceStatus(String instanceId)
                                                  throws RegistryException

Throws:

RegistryException

updateWorkflowNodeInput

public void updateWorkflowNodeInput(WorkflowInstanceNode node,
                                    String data)
                             throws RegistryException

Throws:

RegistryException

updateWorkflowNodeOutput

public void updateWorkflowNodeOutput(WorkflowInstanceNode node,
                                     String data)
                              throws RegistryException

Throws:

RegistryException

searchWorkflowInstanceNodeInput

public List<WorkflowNodeIOData> searchWorkflowInstanceNodeInput(String experimentIdRegEx,
                                                                String workflowNameRegEx,
                                                                String nodeNameRegEx)
                                                         throws RegistryException

Throws:

RegistryException

searchWorkflowInstanceNodeOutput

public List<WorkflowNodeIOData> searchWorkflowInstanceNodeOutput(String experimentIdRegEx,
                                                                 String workflowNameRegEx,
                                                                 String nodeNameRegEx)
                                                          throws RegistryException

Throws:

RegistryException

getWorkflowInstanceNodeInput

public List<WorkflowNodeIOData> getWorkflowInstanceNodeInput(String workflowInstanceId,
                                                             String nodeType)
                                                      throws RegistryException

Throws:

RegistryException

getWorkflowInstanceNodeOutput

public List<WorkflowNodeIOData> getWorkflowInstanceNodeOutput(String workflowInstanceId,
                                                              String nodeType)
                                                       throws RegistryException

Throws:

RegistryException

saveWorkflowExecutionOutput

@Deprecated
public void saveWorkflowExecutionOutput(String experimentId,
                                                   String outputNodeName,
                                                   String output)
                                 throws RegistryException

Deprecated.

Throws:

RegistryException

saveWorkflowExecutionOutput

@Deprecated
public void saveWorkflowExecutionOutput(String experimentId,
                                                   WorkflowIOData data)
                                 throws RegistryException

Deprecated.

Throws:

RegistryException

getWorkflowExecutionOutput

@Deprecated
public WorkflowIOData getWorkflowExecutionOutput(String experimentId,
                                                            String outputNodeName)
                                          throws RegistryException

Deprecated.

Throws:

RegistryException

getWorkflowExecutionOutput

@Deprecated
public List<WorkflowIOData> getWorkflowExecutionOutput(String experimentId)
                                                throws RegistryException

Deprecated.

Throws:

RegistryException

getWorkflowExecutionOutputNames

@Deprecated
public String[] getWorkflowExecutionOutputNames(String exeperimentId)
                                         throws RegistryException

Deprecated.

Throws:

RegistryException

getExperiment

public ExperimentData getExperiment(String experimentId)
                             throws RegistryException

Throws:

RegistryException

getExperimentIdByUser

public List<String> getExperimentIdByUser(String user)
                                   throws RegistryException

Throws:

RegistryException

getExperimentByUser

public List<ExperimentData> getExperimentByUser(String user)
                                         throws RegistryException

Throws:

RegistryException

getExperiments

public List<ExperimentData> getExperiments(HashMap<String,String> params)
                                    throws RegistryException

Throws:

RegistryException

getExperimentByUser

public List<ExperimentData> getExperimentByUser(String user,
                                                int pageSize,
                                                int pageNo)
                                         throws RegistryException

Throws:

RegistryException

updateWorkflowNodeStatus

public void updateWorkflowNodeStatus(NodeExecutionStatus workflowStatusNode)
                              throws RegistryException

Throws:

RegistryException

updateWorkflowNodeStatus

public void updateWorkflowNodeStatus(String workflowInstanceId,
                                     String nodeId,
                                     WorkflowExecutionStatus.State status)
                              throws RegistryException

Throws:

RegistryException

updateWorkflowNodeStatus

public void updateWorkflowNodeStatus(WorkflowInstanceNode workflowNode,
                                     WorkflowExecutionStatus.State status)
                              throws RegistryException

Throws:

RegistryException

getWorkflowNodeStatus

public NodeExecutionStatus getWorkflowNodeStatus(WorkflowInstanceNode workflowNode)
                                          throws RegistryException

Throws:

RegistryException

getWorkflowNodeStartTime

public Date getWorkflowNodeStartTime(WorkflowInstanceNode workflowNode)
                              throws RegistryException

Throws:

RegistryException

getWorkflowStartTime

public Date getWorkflowStartTime(WorkflowExecution workflowInstance)
                          throws RegistryException

Throws:

RegistryException

updateWorkflowNodeGramData

public void updateWorkflowNodeGramData(WorkflowNodeGramData workflowNodeGramData)
                                throws RegistryException

Throws:

RegistryException

getWorkflowInstanceData

public WorkflowExecutionData getWorkflowInstanceData(String workflowInstanceId)
                                              throws RegistryException

Throws:

RegistryException

getWorkflowInstanceNodeData

public NodeExecutionData getWorkflowInstanceNodeData(String workflowInstanceId,
                                                     String nodeId)
                                              throws RegistryException

Throws:

RegistryException

isWorkflowInstanceNodePresent

public boolean isWorkflowInstanceNodePresent(String workflowInstanceId,
                                             String nodeId)
                                      throws RegistryException

Throws:

RegistryException

isWorkflowInstanceNodePresent

public boolean isWorkflowInstanceNodePresent(String workflowInstanceId,
                                             String nodeId,
                                             boolean createIfNotPresent)
                                      throws RegistryException

Throws:

RegistryException

addWorkflowInstance

public void addWorkflowInstance(String experimentId,
                                String workflowInstanceId,
                                String templateName)
                         throws RegistryException

Throws:

RegistryException

updateWorkflowNodeType

public void updateWorkflowNodeType(WorkflowInstanceNode node,
                                   WorkflowNodeType type)
                            throws RegistryException

Throws:

RegistryException

addWorkflowInstanceNode

public void addWorkflowInstanceNode(String workflowInstanceId,
                                    String nodeId)
                             throws RegistryException

Throws:

RegistryException

getExperimentMetaInformation

public ExperimentData getExperimentMetaInformation(String experimentId)
                                            throws RegistryException

Throws:

RegistryException

getAllExperimentMetaInformation

public List<ExperimentData> getAllExperimentMetaInformation(String user)
                                                     throws RegistryException

Throws:

RegistryException

searchExperiments

public List<ExperimentData> searchExperiments(String user,
                                              String experimentNameRegex)
                                       throws RegistryException

Throws:

RegistryException

getVersion

public org.apache.airavata.common.utils.Version getVersion()

setConnectionURI

public void setConnectionURI(URI connectionURI)

getConnectionURI

public URI getConnectionURI()

setCallback

public void setCallback(PasswordCallback callback)

getCallback

public PasswordCallback getCallback()

getExperimentExecutionErrors

public List<ExperimentExecutionError> getExperimentExecutionErrors(String experimentId)
                                                            throws RegistryException

Throws:

RegistryException

getWorkflowExecutionErrors

public List<WorkflowExecutionError> getWorkflowExecutionErrors(String experimentId,
                                                               String workflowInstanceId)
                                                        throws RegistryException

Throws:

RegistryException

getNodeExecutionErrors

public List<NodeExecutionError> getNodeExecutionErrors(String experimentId,
                                                       String workflowInstanceId,
                                                       String nodeId)
                                                throws RegistryException

Throws:

RegistryException

getApplicationJobErrors

public List<ApplicationJobExecutionError> getApplicationJobErrors(String experimentId,
                                                                  String workflowInstanceId,
                                                                  String nodeId,
                                                                  String gfacJobId)
                                                           throws RegistryException

Throws:

RegistryException

getApplicationJobErrors

public List<ApplicationJobExecutionError> getApplicationJobErrors(String gfacJobId)
                                                           throws RegistryException

Throws:

RegistryException

getExecutionErrors

public List<ExecutionError> getExecutionErrors(String experimentId,
                                               String workflowInstanceId,
                                               String nodeId,
                                               String gfacJobId,
                                               ExecutionErrors.Source... filterBy)
                                        throws RegistryException

Throws:

RegistryException

addExperimentError

public int addExperimentError(ExperimentExecutionError error)
                       throws RegistryException

Throws:

RegistryException

addWorkflowExecutionError

public int addWorkflowExecutionError(WorkflowExecutionError error)
                              throws RegistryException

Throws:

RegistryException

addNodeExecutionError

public int addNodeExecutionError(NodeExecutionError error)
                          throws RegistryException

Throws:

RegistryException

addApplicationJobExecutionError

public int addApplicationJobExecutionError(ApplicationJobExecutionError error)
                                    throws RegistryException

Throws:

RegistryException

addApplicationJob

public void addApplicationJob(ApplicationJob job)
                       throws RegistryException

Throws:

RegistryException

updateApplicationJob

public void updateApplicationJob(ApplicationJob job)
                          throws RegistryException

Throws:

RegistryException

updateApplicationJobStatus

public void updateApplicationJobStatus(String gfacJobId,
                                       ApplicationJob.ApplicationJobStatus status,
                                       Date statusUpdateTime)
                                throws RegistryException

Throws:

RegistryException

updateApplicationJobData

public void updateApplicationJobData(String gfacJobId,
                                     String jobdata)
                              throws RegistryException

Throws:

RegistryException

updateApplicationJobSubmittedTime

public void updateApplicationJobSubmittedTime(String gfacJobId,
                                              Date submitted)
                                       throws RegistryException

Throws:

RegistryException

updateApplicationJobStatusUpdateTime

public void updateApplicationJobStatusUpdateTime(String gfacJobId,
                                                 Date completed)
                                          throws RegistryException

Throws:

RegistryException

updateApplicationJobMetadata

public void updateApplicationJobMetadata(String gfacJobId,
                                         String metadata)
                                  throws RegistryException

Throws:

RegistryException

getApplicationJob

public ApplicationJob getApplicationJob(String gfacJobId)
                                 throws RegistryException

Throws:

RegistryException

getApplicationJobsForDescriptors

public List<ApplicationJob> getApplicationJobsForDescriptors(String serviceDescriptionId,
                                                             String hostDescriptionId,
                                                             String applicationDescriptionId)
                                                      throws RegistryException

Throws:

RegistryException

getApplicationJobs

public List<ApplicationJob> getApplicationJobs(String experimentId,
                                               String workflowExecutionId,
                                               String nodeId)
                                        throws RegistryException

Throws:

RegistryException

isApplicationJobExists

public boolean isApplicationJobExists(String gfacJobId)
                               throws RegistryException

Throws:

RegistryException

getApplicationJobStatusHistory

public List<ApplicationJobStatusData> getApplicationJobStatusHistory(String jobId)
                                                              throws RegistryException

Throws:

RegistryException

getUsers

public List<AiravataUser> getUsers()
                            throws RegistryException

Throws:

RegistryException

isCredentialExist

public boolean isCredentialExist(String gatewayId,
                                 String tokenId)
                          throws RegistryException

Throws:

RegistryException

getCredentialPublicKey

public String getCredentialPublicKey(String gatewayId,
                                     String tokenId)
                              throws RegistryException

Throws:

RegistryException

createCredential

public String createCredential(String gatewayId,
                               String tokenId)
                        throws RegistryException

Throws:

RegistryException

createCredential

public String createCredential(String gatewayId,
                               String tokenId,
                               String username)
                        throws RegistryException

Throws:

RegistryException